Survival-associated meQTLs across different cancer types
We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| ESCA | rs62526624 | chr8:120870795 | C/A | 4.17E-7 | 182 | 13 | 19.3 | 3.73 | KM Plot |
| ESCA | rs62526635 | chr8:120875926 | C/T | 6.81E-6 | 184 | 12.87 | 18.57 | 3.6 | KM Plot |
| ESCA | rs62526636 | chr8:120877235 | T/C | 6.81E-6 | 184 | 12.87 | 18.57 | 3.6 | KM Plot |
| ESCA | rs62526637 | chr8:120877327 | A/G | 6.81E-6 | 184 | 12.93 | 18.57 | 3.6 | KM Plot |
| ESCA | rs62526638 | chr8:120877580 | A/G | 6.81E-6 | 184 | 12.87 | 18.57 | 3.6 | KM Plot |
| ESCA | rs62526639 | chr8:120877977 | A/G | 6.81E-6 | 184 | 12.87 | 18.57 | 3.6 | KM Plot |
| ESCA | rs62526640 | chr8:120878607 | A/T | 6.81E-6 | 184 | 12.87 | 18.57 | 3.6 | KM Plot |
| ESCA | rs62526641 | chr8:120878716 | A/G | 6.81E-6 | 184 | 12.87 | 18.57 | 3.6 | KM Plot |
| ESCA | rs62526642 | chr8:120880386 | G/T | 8.15E-6 | 181 | 12.93 | 18.58 | 3.6 | KM Plot |
| ESCA | rs626163 | chr15:65613654 | A/C | 7.07E-5 | 183 | 12.9 | 16.53 | 4.08 | KM Plot |
| ESCA | rs640375 | chr15:65614565 | G/T | 7.07E-5 | 183 | 12.9 | 16.53 | 4.08 | KM Plot |
| ESCA | rs6426206 | chr1:247189356 | G/A | 1.02E-7 | 181 | 13.1 | 17.27 | 3.87 | KM Plot |
| ESCA | rs6426207 | chr1:247189468 | C/T | 1.02E-7 | 181 | 13.1 | 17.27 | 3.87 | KM Plot |
| ESCA | rs6449237 | chr4:10027643 | A/G | 6.05E-5 | 183 | 13.1 | 13.6 | 8.1 | KM Plot |
| ESCA | rs6449238 | chr4:10027744 | G/A | 3.69E-5 | 184 | 13.22 | 13.6 | 8.1 | KM Plot |